There’s something about the chill of fall that pulls me straight into the kitchen, and every year, the first cool breeze brings pumpkin front and center. This pumpkin cottage cheese bake isn’t just another autumn casserole—it’s a warm hug of creamy pumpkin, savory herbs, and the protein-packed power of cottage cheese. It’s inspired by a dish I tasted in Kyoto—where balance and texture taught me more than any textbook ever could.
Back home in Asheville, I reimagined it using what I had on hand—fresh local pumpkin and a tub of creamy cottage cheese from the market. My grandma would’ve raised an eyebrow at the combo, but trust me, it works. Whether you serve it for brunch, dinner, or as a cozy side dish at your next fall gathering, this recipe is all about flavor, nutrition, and feel-good comfort.
Let’s dive into what makes this pumpkin cottage cheese bake a standout recipe that you’ll want to make again and again.
Table of Contents
Why You’ll Love This Pumpkin Cottage Cheese Bake

Creamy Texture Meets Savory Pumpkin Goodness
This pumpkin cottage cheese bake offers the best of both worlds: the rich, velvety smoothness of roasted pumpkin and the light, slightly tangy lift from whipped cottage cheese. The result? A comforting casserole with a fluffy custard-like center that melts on your fork. Unlike heavier dishes, it’s satisfying without being over-the-top rich.
For fans of fall flavors, this dish delivers those warm, familiar notes of nutmeg, thyme, and roasted pumpkin in every bite. If you’ve enjoyed cozy dishes like pumpkin and cottage cheese casserole or lighter pumpkin pie cottage cheese, this bake strikes the perfect savory balance.
High-Protein, Low-Fuss and Naturally Gluten-Free
What sets this pumpkin cottage cheese bake apart? Cottage cheese. It’s packed with protein and gives the dish a soft structure without needing flour. That makes this a naturally gluten-free option perfect for those watching their carb intake or looking to up their protein game. It’s also beginner-friendly—no complicated steps, no pastry shells, just blend, bake, and serve.
You’ll also love that this pumpkin cottage cheese bake can double as a main or a side. I often serve it alongside a simple salad or next to roasted chicken, but it’s just as satisfying solo. And if you’re into cozy healthy eats, you’ll definitely want to try this alongside cottage cheese pumpkin dessert for a full-on pumpkin day.
Ingredients for the Perfect Pumpkin Cottage Cheese Bake
Simple, Wholesome Ingredients That Deliver Big Flavor

The magic of this pumpkin cottage cheese bake lies in how a few humble ingredients come together to create something hearty, healthy, and delicious. You don’t need a long shopping list—just quality components that each play a role in building the dish’s texture and flavor. If you’re like me and love experimenting with fall bakes, you’ll find these ingredients become pantry staples.
Here’s everything you’ll need to bring this cozy pumpkin cottage cheese bake recipe to life:
Main Ingredients:
- Pumpkin puree – Fresh roasted pumpkin brings out a deeper flavor, but canned works just as well if you’re short on time. Make sure it’s pure pumpkin, not pie filling.
- Cottage cheese – Use full-fat or 2% for the best texture and creaminess. Cottage cheese is what gives this bake its signature protein boost and slight tang. (If you’re a fan of its versatility, check out air fryer pumpkin cottage cheese muffins for another savory-sweet idea.)
- Eggs – They bind everything and help the bake set up soft and custardy.
- Parmesan or Gruyère cheese – Adds a savory depth and helps create a golden, crisp top layer.
- Almond flour or oat flour (optional) – For those who want a touch more structure, a couple of tablespoons adds a gentle firmness while keeping the bake gluten-free.
- Olive oil or melted butter – For moisture and richness.
- Garlic and onion powder – Boost flavor without bulk.
- Fresh thyme or sage – These herbs make the pumpkin flavor sing.
- Salt and pepper – To balance and enhance all the elements.
Optional Add-Ins:
- Chopped spinach or kale – Adds color, nutrients, and a touch of bitterness to contrast the creamy filling.
- Crumbled feta or goat cheese – For tangy pops of flavor.
- Cooked quinoa or brown rice – A great addition for extra bulk, similar to this rice and cottage cheese casserole.
Pantry and Kitchen Notes:
If you’re prepping ahead for the week, consider doubling this recipe. It keeps well and reheats beautifully. You can also prep it in muffin tins for single servings—a trick I often use with my 4-ingredient cottage cheese muffins for meal prep.
Keep in mind that using quality cottage cheese matters—cheap brands may water down your filling. For more savory inspiration, especially if you love greens and cheese pairings, check out my cottage cheese and spinach casserole.
How to Make This Pumpkin Cottage Cheese Bake

Quick Prep, Big Comfort: A No-Stress Fall Favorite
Making this pumpkin cottage cheese bake is as cozy as it tastes. With just one bowl (and a blender if you want ultra-smooth texture), you’ll have it in the oven in under 15 minutes. Whether you’re new to savory bakes or you’ve made a dozen cottage cheese casseroles, this recipe is designed to be foolproof.
And remember: using cottage cheese in bakes isn’t just trendy—it adds body, protein, and a creamy tang that perfectly complements roasted pumpkin. That’s what makes this pumpkin cottage cheese bake a go-to during cooler months.
Step-by-Step Instructions:
1. Preheat and Prep
Set your oven to 375°F (190°C) and lightly grease a 9×9-inch baking dish or similar casserole pan. You want a dish with enough surface area to give the top a nice golden finish.
2. Blend the Base (Optional)
If you prefer a smooth texture, blend together:
- 1 ½ cups of pumpkin puree
- 1 cup of cottage cheese
- 3 large eggs
- 2 tablespoons olive oil
- Salt, pepper, garlic powder, and onion powder to taste
- 1 tablespoon fresh thyme or sage
Blending helps break down curds from the cottage cheese, but it’s also totally okay to leave it chunky for a more rustic feel.
3. Mix in the Extras
Stir in:
- ¼ cup grated parmesan or Gruyère
- Optional: a handful of chopped spinach or pre-cooked quinoa
- Optional: a sprinkle of almond flour if you like a firmer texture
You can make this pumpkin cottage cheese bake more savory by folding in cooked mushrooms or even a bit of caramelized onion.
4. Pour and Bake
Transfer the mixture to your greased baking dish. Top with extra cheese or a few sage leaves for garnish. Bake for 35–40 minutes, or until the center is just set and the top is golden brown.
5. Cool and Slice
Let the bake cool for 10 minutes before slicing. This helps everything set and makes clean slices easier. It also deepens the flavor—so don’t skip this step!
Pro Tips for Success:
- Use full-fat cottage cheese for richness. If you’ve only used it in sweet dishes like pumpkin pie cottage cheese, you’ll be amazed how well it works in savory bakes.
- For a firmer set (especially if slicing to serve guests), add 2 tablespoons of oat flour.
- Bake until the center jiggles slightly—it will finish setting as it cools.
If you’re into baked egg dishes, you’ll love how similar this is to a crustless quiche or cottage cheese egg bake, but with a rich fall twist.
How to Serve This Pumpkin Cottage Cheese Bake

Perfect as a Cozy Main or a Wholesome Side Dish
This pumpkin cottage cheese bake is as flexible as it is flavorful. Serve it warm from the oven as a comforting vegetarian main, or pair it as a hearty side dish with your favorite protein. The creamy center and gently roasted edges make it feel indulgent, while the cottage cheese and pumpkin keep it balanced and nourishing.
At our Asheville bistro, I’ve served versions of this bake both solo and alongside roasted chicken, seared salmon, and even a kale salad with apple vinaigrette. That versatility is what makes it a true fall staple—and one of my favorite ways to enjoy pumpkin beyond the usual pies and lattes.
If you’re already a fan of savory dishes like cottage cheese and spinach casserole, this one will easily become a new favorite at your table.
Serving Suggestions That Make It Shine
- Brunch Spread: Slice into squares and serve with poached eggs and roasted tomatoes. It’s a cozy twist on a breakfast bake and works beautifully for holiday brunches.
- Dinner Side Dish: Pair this pumpkin cottage cheese bake with roasted turkey or a fall-inspired pork tenderloin. A light, peppery arugula salad balances out the creamy richness.
- Meal Prep Friendly: Portion into containers with sautéed greens or quinoa for a balanced weekday lunch. It reheats well in the microwave or oven.
- Holiday Potluck Hit: Bring it as your go-to vegetarian dish. It’s easy to reheat, travel-friendly, and unique enough to stand out from the typical casseroles.
For those looking for a more indulgent finish, pair a slice with a dollop of crème fraîche or even a light drizzle of maple syrup—yes, really! That little contrast of sweet with the savory pumpkin base brings a full-circle fall flavor.
And if you’re curious about turning this into something sweeter, try the similar cottage cheese pumpkin dessert for a next-level finish.
This pumpkin cottage cheese bake also pairs wonderfully with herbal teas or warm apple cider, making it an ideal dish for cozy, casual gatherings.
How to Store Pumpkin Cottage Cheese Bake
Keep It Fresh: Store, Freeze, and Reheat with Confidence
One of the best parts about this pumpkin cottage cheese bake is how well it holds up after baking. Whether you’ve made it ahead for a busy week or you’ve got a few servings left from your holiday spread, storing it properly will keep the flavors fresh and the texture just right.
Since this bake contains both cottage cheese and eggs, refrigeration is key to maintaining its quality and safety. The creamy pumpkin and cottage cheese center firms up beautifully in the fridge, making it ideal for slicing and reheating without losing its charm.
Refrigerator Storage Tips
After the bake cools to room temperature, transfer any leftovers into an airtight container or wrap the baking dish tightly with foil or plastic wrap.
- Refrigerate for up to 4 days
- Best reheated in the oven at 350°F (about 10–12 minutes) or microwave for 1–2 minutes per slice
- Keep stored on the top shelf of your fridge to maintain consistent temperature
If you’ve made other bakes like cottage cheese muffins, you know how crucial it is not to let dairy-heavy dishes sit out too long. The same goes for this pumpkin cottage cheese bake—store it within two hours after serving.
Freezing for Later
Yes, you can freeze this pumpkin cottage cheese bake! I recommend freezing individual portions so they thaw and reheat evenly.
- Freeze up to 2 months in freezer-safe containers or tightly wrapped slices
- Thaw overnight in the fridge
- Reheat in a 350°F oven until warmed through (about 15 minutes)
Avoid freezing the unbaked mixture—the texture changes due to the eggs and cottage cheese. Bake first, then freeze.
If you’re looking for more freezer-friendly bake ideas, try the cottage cheese egg bake or rice and cottage cheese casserole for delicious batch-cooked options.
Recipe Card

Pumpkin Cottage Cheese Bake
Equipment
- 9×9 inch baking dish
- Mixing bowl
- blender or hand mixer (optional)
- Spatula or spoon
- Oven
Ingredients
- 1.5 cups pumpkin puree (fresh or canned, unsweetened)
- 1 cup cottage cheese (full-fat or 2%)
- 3 large eggs
- 2 tbsp olive oil or melted butter
- 1 tbsp fresh thyme or sage (chopped)
- 1/4 cup grated parmesan or Gruyère cheese
- 1 tsp garlic powder
- 1 tsp onion powder
- 1/2 tsp salt (adjust to taste)
- 1/4 tsp black pepper
- 2 tbsp almond flour or oat flour (optional, for firmer texture)
- 1 handful chopped spinach or pre-cooked quinoa (optional)
Instructions
- Preheat your oven to 375°F (190°C) and lightly grease a 9×9-inch baking dish.
- In a bowl (or blender for smooth texture), combine pumpkin puree, cottage cheese, eggs, olive oil, garlic powder, onion powder, salt, pepper, and herbs.
- Fold in grated cheese, almond flour, and any optional add-ins like spinach or quinoa.
- Pour mixture into prepared dish, spread evenly, and top with extra cheese or sage leaves if desired.
- Bake for 35–40 minutes until center is just set and top is golden brown.
- Let cool for 10 minutes before slicing to allow the bake to firm up and enhance flavor.
Notes
Nutrition
FAQs About Pumpkin Cottage Cheese Bake
Does pumpkin need to be refrigerated after baking?
Yes. Once your pumpkin cottage cheese bake has cooled, it should be refrigerated within two hours. Because this dish includes cottage cheese and eggs, keeping it chilled is essential for food safety. Store it in an airtight container or tightly wrap your baking dish and keep it in the fridge for up to four days. Even simple bakes like pumpkin and cottage cheese casserole need refrigeration for freshness and safety.
What temperature do I bake cottage cheese at?
For best results, bake cottage cheese-based dishes like this one at 375°F (190°C). This temperature allows the eggs to set gently without drying out the cottage cheese, while also creating a slightly crisp top layer. It’s the sweet spot for savory bakes, much like with air fryer cottage cheese muffins with pumpkin, where even heat creates a golden, tender finish.
What are common pumpkin pie mistakes?
While pumpkin pie is different from this savory bake, the mistakes often overlap—especially overbaking, underseasoning, and using too much liquid. Avoid watery puree or low-fat cottage cheese, which can make your pumpkin cottage cheese bake too soft. Also, don’t skip seasoning; pumpkin loves herbs and salt. A flavorful bake—like this one or the cottage cheese pumpkin dessert—relies on balancing sweet or savory with fat and spice.
How long can you leave pumpkin cheesecake out?
Similar to a pumpkin cottage cheese bake, a pumpkin cheesecake shouldn’t sit out for more than two hours. After that, bacteria can grow rapidly. If you’re serving a bake like this at a party, keep an eye on the time and refrigerate any leftovers promptly.
How long can cooked pumpkin sit out?
No more than two hours at room temperature. This applies whether the pumpkin is part of a pie, a savory bake, or just roasted. Even though it’s a vegetable, once cooked, it becomes perishable—especially when combined with dairy, as in this pumpkin cottage cheese bake.
What is the best way to store pumpkin?
Uncooked pumpkin should be kept in a cool, dry place. Once cut or pureed, it must be refrigerated in an airtight container and used within five days. When baking dishes like pumpkin cottage cheese bake, storing leftovers promptly is key to preserving texture and flavor. You can also freeze pumpkin puree or leftover slices for later use in recipes like pumpkin pie cottage cheese.
Conclusion: Cozy, Nourishing, and Utterly Delicious
When I first started experimenting with cottage cheese in baked dishes, I never imagined it would pair so beautifully with pumpkin. But after that autumn in Kyoto—where I learned how even the simplest ingredients could be transformed with care and balance—I came home inspired to blend what I knew with what I’d just discovered.
This pumpkin cottage cheese bake is a reflection of that. It’s easy to make, packed with flavor, and delivers real comfort with every forkful. Whether you’re whipping it up for a cozy dinner, prepping for the week, or sharing it at your next potluck, this dish brings both nourishment and heart to the table.
Thanks for stopping by the kitchen. If you loved this, try pairing it with a fresh salad or explore other savory ideas like my cottage cheese and spinach casserole or rice and cottage cheese casserole. I hope this recipe finds a place in your fall rotation—and in your memories, just like it did in mine.
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